{"id":706,"date":"2022-02-07T15:33:12","date_gmt":"2022-02-07T20:33:12","guid":{"rendered":"http:\/\/www.loewenlabs.com\/peter\/?page_id=706"},"modified":"2022-02-08T13:47:52","modified_gmt":"2022-02-08T18:47:52","slug":"protein-structures","status":"publish","type":"page","link":"http:\/\/www.loewenlabs.com\/peter\/protein-structures\/","title":{"rendered":"Protein Structures"},"content":{"rendered":"\n
My thanks to Ignacio Fita for starting me down this road.

1. 1IPH – HPII of E. coli<\/em> at 2.8 \u00c5 View PDB<\/a>

2. 1CF9 – V169C variant of HPII of E. coli<\/em> View PDB<\/a>

3. 1GG9 – H128N variant of HPII of E. coli<\/em> View PDB<\/a>

4. 1GGE – HPII of E. coli<\/em> at 1.9 \u00c5 View PDB<\/a>

5. 1GGF – H128N variant of HPII with H2<\/sub>O2<\/sub> View PDB<\/a>

6. 1GGH – H128A variant of HPII of E. coli<\/em> View PDB<\/a>

7. 1GGJ – N201A of variant HPII of E. coli<\/em> View PDB<\/a>

8. 1GGK – N201H variant of HPII of E. coli<\/em> View PDB <\/a>

9. 1IPH – HPII of E. coli<\/em> at 2.8 \u00c5 View PDB<\/a>

10. 1M7S – CatF of P. syringae<\/em> View PDB<\/a>

11. (1MWV) 5L05 – KatG of B. pseudomallei<\/em> View PDB<\/a>

12. 1P7Y – D181A variant of HPII of E. coli<\/em> View PDB<\/a>

13. 1P7Z – D181S variant of HPII of E. coli<\/em> View PDB<\/a>

14. 1P80 – D181Q variant of HPII of E. coli<\/em> View PDB<\/a>

15. 1P81 – D181E variant of HPII of E. coli<\/em> View PDB<\/a>

16. 1QF7 – H392Q variant of HPII of E. coli<\/em> View PDB<\/a>

17. 1QWL – KatA of H. pylori<\/em> or HPC View PDB<\/a>

18. 1QWM – HPC with formate View PDB<\/a>

19. 1QWS – D181N variant of HPII of E. coli<\/em> View PDB<\/a>

20. 1U2J – HPI of E. coli<\/em> C-terminal domain P21<\/sub>21<\/sub>21<\/sub> View PDB<\/a>

21. 1U2K – HPI C-terminal domain I41<\/sub> View PDB<\/a>

22. 1U2L – HPI of E. coli<\/em> C-terminal domain P1 View PDB<\/a>

23. (1X7U) 5L02 – S324T variant of KatG of B. pseudomallei<\/em> View PDB<\/a>

24. 1YE9 – truncated variant of HPII View PDB<\/a>

25. 2IQF – Compound I of HPC View PDB<\/a> (2B2Q)

26. 5SW4 – BpKatG at pH 7.5 View PDB<\/a>

27. (2B2O) 5SW5 – BpKatG at pH 8.0 View PDB<\/a>

28. (2B2R) 5SW6 – BpKatG peracetate Cpd I View PDB<\/a>

29. (2B2S) 5SX0 – BpKatG Cpd I shifted to pH 7.5 View PDB<\/a>

30. (2FXG) 5SX3 – BpKatG at pH 4.5 View PDB<\/a>

31. (2FXH) 5SX6 – BpKatG at pH 6.5 View PDB<\/a>

32. (2FXJ) 5SX7 – BpKatG at pH 8.5 View PDB<\/a>

33. (2DV1) 5SX1 – D141E variant of BpKatG View PDB<\/a>

34. (2DV2) 5SX2 – D141E variant of BpKatG pH 8.0 View PDB<\/a>

35. 2QLW – RhaU View PDB<\/a>

36. 2QLX – RhaU with rhamnose bound View PDB<\/a>

37. (3N3N) 5SXQ – BpKatG with INH bound View PDB<\/a>

38. (3N3O) 5SXR – BpKatG with NAD+<\/sup> bound View PDB<\/a>

39. (3N3P) 5SXS – BpKatG with AMP and INH bound View PDB<\/a>

40. (3N3Q) 5SXT – S324T variant of BpKatG with INH bound View PDB<\/a>

41. (3N3R) 5SXW – E198A variant of BpKatG View PDB<\/a>

42. (3N3S) 5SXX – E198A variant of BpKatG crystallized with INH View PDB<\/a>

43. 3P9P – I274V variant of HPII of E. coli<\/em> View PDB<\/a>

44. 3P9Q – I274C variant of HPII of E. coli<\/em> View PDB<\/a>

45. 3P9R – I274G variant of HPII of E. coli<\/em> View PDB<\/a>

46. 3P9S – I274A variant of HPII of E. coli<\/em> View PDB<\/a>

47. 3PQ2 – I274C variant of HPII of E. coli<\/em> – Images 1-6 View PDB<\/a>

48. 3PQ3 – I274C variant of HPII of E. coli<\/em> – Images 7-12 View PDB<\/a>

49. 3PQ4 – I274C variant of HPII of E. coli<\/em> – Images 13-18 View PDB<\/a>

50. 3PQ5 – I274C variant of HPII of E. coli<\/em> – Images 19-24 View PDB<\/a>

51. 3PQ6 – I274C variant of HPII of E. coli<\/em> – Images 25-30 View PDB<\/a>

52. 3PQ7 – I274C variant of HPII of E. coli<\/em> – Images 31-36 View PDB<\/a>

53. 3PQ8 – I274C variant of HPII of E. coli<\/em> – Images 37-42 View PDB<\/a>

54. 3TTT – F413Y variant of HPII of E. coli<\/em> View PDB<\/a>

55. 3TTU – F413Y\/H128N variant of HPII of E. coli<\/em> View PDB<\/a>

56. 3TTV – F413Y\/T115A variant of HPII of E. coli<\/em> View PDB<\/a>

57. 3TTW – F413E variant of HPII of E. coli<\/em> View PDB<\/a>

58.3TTX – F413K variant of HPII of E. coli<\/em> View PDB<\/a>

59. 3UT2 – KatG2 of Magnaporthe grisea<\/em> View PDB<\/a>

60. 4ENP – E530A variant of HPII of E. coli<\/em> View PDB<\/a>

61. 4ENQ – E530D variant of HPII of E. coli<\/em> View PDB<\/a>

62. 4ENR – E530I variant of HPII of E. coli<\/em> View PDB<\/a>

63. 4ENS – E530Q variant of HPII of E. coli<\/em> View PDB<\/a>

64. 4ENT – S234A variant of HPII of E. coli<\/em> View PDB<\/a>

65. 4ENU – S234D variant of HPII of E. coli<\/em> View PDB<\/a>

66. 4ENV – S234I variant of HPII of E. coli<\/em> View PDB<\/a>

67. 4ENW – S234N variant of HPII of E. coli<\/em> View PDB<\/a>

68. 4FGW – GPD1 of S. cerevisiae<\/em> View PDB<\/a>

69. 4HHH – Rubisco from Pisum sativum<\/em> View PDB<\/a>

70. (4KA5) 5SYH – D141A variant of BpKatG View PDB<\/a>

71. (4KA6) 5SYI – D141A variant of BpKatG with INH bound View PDB<\/a>

72. (4KWQ) 5SYJ – D141A with INH soaked into crystal View PDB<\/a>

73. 4MKV – Pea rubisco with abscisic acid bound View PDB<\/a>

74. (4MVP) 5SYK – BpKatG soaked in H2O2 View PDB<\/a>

75. 4QOL – Bacillus pumilus<\/em> catalase (BPC) View PDB<\/a>

76. 4QOM – BPC with pyrogallol bound View PDB<\/a>

77. 4QON – BPC with catechol bound View PDB<\/a>

78. 4QOO – BPC with resorcinol bound View PDB<\/a>

79. 4QOP – BPC with hydroquinone bound View PDB<\/a>

80. 4QOQ – BPC with guaiacol bound View PDB<\/a>

81. 4QOR – BPC with chlorophenol bound View PDB<\/a>

(82. 4QZJ) 5SYL – BpKatG with KCN bound View PDB<\/a>

83. (4QZK) 5SYU – E242Q variant of BpKatG View PDB<\/a>

84. (4QZL) 5SYV – N240D variant of BpKatG View PDB<\/a>

85. (4QZN) 5SYW – Q233E variant of BpKatG View PDB<\/a>

86. (4QZO) 5KSN – S324G variant of BpKatG View PDB<\/a>

87. (4QZP) 5SYX – W139F variant of BpKatG View PDB<\/a>

88. 5KQ0 – A290D variant of BpKatG View PDB<\/a>

89. 5KQ2 – A357D variant of BpKatG View PDB<\/a>

90. 5KQ3 – D141A\/Q233E variant of BpKatG View PDB<\/a>

91. 5KQ6 – A359D variant of BpkatG View PDB<\/a>

92. 5KQ7 – D141A\/Q233E\/N240D variant of BpKatG View PDB<\/a>

93. 5KQH – V293D variant of BpKatG View PDB<\/a>

94. 5KQI – L326D variant of BpKatG View PDB<\/a>

95. 5KQK – Q233E\/N240D variant of BpKatG View PDB<\/a>

96. 5KQN – H381S variant of BpKatG View PDB<\/a>

97. 5KQQ – W153F variant of BpKatG View PDB<\/a>

98. 5KSF – D141A variant of BpKatG with acetate View PDB<\/a>

99. 5KSG – W153F variant of BpKatG with isoniazid bound View PDB<\/a>

100. 5KSK – BpKatG treated with acetate View PDB<\/a>

101. 5KSN – S324G variant of BpKatG with isoniazid bound View PDB<\/a>

102. 5KT8 – W139F variant of BpKatG with isoniazid bound View PDB<\/a>

103. 5TXQ – A143D variant of BpKatG View PDB<\/a>

104. 5V2D – Lignostilbene dioxygenase of P. brassicacaerum<\/em> View PDB<\/a>

105. 6B9B – BpKatG with maltose bound View PDB<\/a>

106. 6CAW – W95F variant of BpKatG View PDB<\/a>

107. 6CC6 – W202F variant of BpKatG View PDB<\/a>

108. 6CDQ – W202F variant of BpKatG with INH bound View PDB<\/a>

109. 6CEK – D141N variant of BpKatG View PDB<\/a>

110. 6CFQ – D141N variant of BpKatG with INH bound View PDB<\/a>

111. 6MPY – BpKatG crystallized with benzoyl hydrazide View PDB<\/a>

112. 6MQ0 – BpKatG crystallized with furoyl hydrazide View PDB<\/a>

113. 6MQ1 – BpKatG crystallized with ABTS View PDB<\/a>

114. 6ND8 – Rhodocetin-integrin complex with barium View PDB<\/a>

115. 6ND9 – Rhodocetin-integrin complex with calcium View PDB<\/a>

116. 6NDA – Rhodocetin-integrin complex with cadmium View PDB<\/a>

117. 6NDB – Rhodocetin-integrin complex with cobalt View PDB<\/a>

118. 6NDC – Rhodocetin-integrin complex with chromium View PDB<\/a>

119. 6NDD – Rhodocetin-integrin complex with manganese View PDB<\/a>

120. 6NDE – Rhodocetin-integrin complex with prasedymium View PDB<\/a>

121. 6NDF – Rhodocetin-integrin complex with strontium View PDB<\/a>

122. 6NDG – Rhodocetin-integrin complex with yttrium View PDB<\/a>

123. 6NDH – Rhodocetin-integrin complex with zinc View PDB<\/a>

124. 6OOL – Ectodomain of mouse UNC5H2 View PDB<\/a><\/td><\/tr><\/tbody><\/table><\/figure>\n","protected":false},"excerpt":{"rendered":"

My thanks to Ignacio Fita for starting me down this road.1. 1IPH – HPII of E. coli at 2.8 \u00c5 View PDB 2. 1CF9 – V169C variant of HPII of E. coli View PDB 3. 1GG9 – H128N variant of HPII of E. coli View PDB 4. 1GGE – HPII of E. coli at […]<\/p>\n","protected":false},"author":2,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-706","page","type-page","status-publish","hentry","odd"],"_links":{"self":[{"href":"http:\/\/www.loewenlabs.com\/peter\/wp-json\/wp\/v2\/pages\/706","targetHints":{"allow":["GET"]}}],"collection":[{"href":"http:\/\/www.loewenlabs.com\/peter\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"http:\/\/www.loewenlabs.com\/peter\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"http:\/\/www.loewenlabs.com\/peter\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"http:\/\/www.loewenlabs.com\/peter\/wp-json\/wp\/v2\/comments?post=706"}],"version-history":[{"count":7,"href":"http:\/\/www.loewenlabs.com\/peter\/wp-json\/wp\/v2\/pages\/706\/revisions"}],"predecessor-version":[{"id":722,"href":"http:\/\/www.loewenlabs.com\/peter\/wp-json\/wp\/v2\/pages\/706\/revisions\/722"}],"wp:attachment":[{"href":"http:\/\/www.loewenlabs.com\/peter\/wp-json\/wp\/v2\/media?parent=706"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}